Factual error: When everyone went up in the hot air balloon the sun and the moon are both visible. The illuminated side of the moon is facing in the wrong/other direction from the sun, which doesn't work.
Tim and Xandir, Sitting in a Tree... - S2-E11
Continuity mistake: When an Entertainment Weekly magazine falls onto the table and Foxxy and Clara both hold it. If you look at Foxxy's hand you see that her furry bracelets suddenly disappear and then reappear.
Tag Team Trial: Part 1 - S1-E10
Other mistake: When Jaden explains Elemental Hero Rampart Blaster's ability to Syrus and the Paradox Brothers, Jaden has Rampart Blaster attack the brothers directly. Just as Jaden says "Blast them with rampart mirage!", Elemental Hero Rampart Blaster is in defense mode somehow standing on top of the Elemental Hero Clayman card, rather than the Elemental Hero Rampart Blaster card. (00:16:10)